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@@ -8,23 +8,18 @@ export LIBCLANG_PATH=/cvmfs/sft.cern.ch/lcg/releases/clang/8.0.0-ed577/x86_64-ce
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export CLANG_HEADER=/cvmfs/sft.cern.ch/lcg/releases/clang/8.0.0-ed577/x86_64-centos7/lib/clang/8.0.0/include/
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alias set_conda="source /usr/scripts/set_conda.sh && source ~/.set_conda_local"
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-alias rf="set_conda && conda activate root_forge"
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-alias ipy="set_conda && conda activate root_forge_36 && ipython"
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-export CONDOR_LOGS=/ceph/users/kheinicke/condor_logs
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-export D=/ceph/users/kheinicke/b2oc/dsk-run2
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+function ipy () {
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+ if ! which ipython &> /dev/null; then
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+ set_conda
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+ conda activate root_forge
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+ fi
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+ ipython
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+}
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-function batchmake () {
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- mkdir -p $CONDOR_LOGS/{stderr,log,stdout}
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- snakemake --cores 10000 --local-cores 64 --latency-wait 1 \
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- --max-jobs-per-second 32 --max-status-checks-per-second 512 \
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- --drmaa \
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-" getenv = True "$'\n'\
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-" request_cpus = {threads}"$'\n'\
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-" output = $CONDOR_LOGS/stdout/{rule}.{wildcards}.out"$'\n'\
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-" error = $CONDOR_LOGS/stderr/{rule}.{wildcards}.err"$'\n'\
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-" logs = $CONDOR_LOGS/log/{rule}.{wildcards}.log "$'\n'\
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-" request_memory = 8G "$'\n'\
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-" +MaxRunHours = ${MAXRUNHOURS:-24} " \
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-${*} | sed -u "s/DEBUG: Sleeping for a moment/./"
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+function rf () {
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+ if ! which conda &> /dev/null; then
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+ set_conda
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+ fi
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+ conda activate root_forge
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}
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